SubtiBank SubtiBank
rpe [2019-07-01 10:30:28]
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

rpe [2019-07-01 10:30:28]

ribulose 5-phosphate 3-epimerase
Locus
BSU15790
Isoelectric point
5.65
Molecular weight
23.19 kDa
Protein length
217 aa Sequence Blast
Gene length
654 bp Sequence Blast
Function
pentose phosphate pathway
Product
ribulose 5-phosphate 3-epimerase
Essential
no
E.C.
5.1.3.1
Synonyms
yloR
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
Loading

Categories containing this gene/protein

  • Metabolism → Carbon metabolism → Carbon core metabolism → Pentose phosphate pathway

    • Gene

    Coordinates
    1,654,004 1,654,657

    The protein

    Catalyzed reaction/ biological activity

  • D-ribulose 5-phosphate = D-xylulose 5-phosphate (according to Swiss-Prot)

    • Protein family

  • ribulose-phosphate 3-epimerase family (according to Swiss-Prot)

    • Structure

  • 1TQJ (from Synechocystis sp., 61% identity, 75% similarity) PubMed

    • Expression and Regulation

    Operons

    Genes
    prpC-prkC-cpgA-rpe-yloS
    Description
    PubMed
    view in new tab

    Biological materials

    Mutant

  • MGNA-B374 (yloR::erm), available at the NBRP B. subtilis, Japan
  • BKE15790 (rpe::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_AGATGGTGCAACCTTTATCA, downstream forward: _UP4_TAAGCAGCTTTAGAAAAGAG
  • BKK15790 (rpe::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_AGATGGTGCAACCTTTATCA, downstream forward: _UP4_TAAGCAGCTTTAGAAAAGAG

    • FLAG-tag construct

  • GP1405 (spc, based on pGP1331), available in Jörg Stülke's lab

    • References

    Loading